Primary Databases
Global repositories for nucleotide, protein, and structural data.
NCBI GenBank
An annotated collection of all publicly available DNA sequences.
UniProt
The gold-standard resource for protein sequence and functional information.
PDB (Protein Data Bank)
The single global archive of 3D macromolecular structure data.
Analysis Pipelines
Standard computational environments for processing omics data.
Bioconductor
Open source software for the analysis of high-throughput genomic data using R.
Galaxy Project
A web-based platform for accessible, reproducible, and transparent computational research.
Nextflow / nf-core
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Specialized Proteomics
Resources specifically for mass-spectrometry and protein interaction.
ProteomeXchange
Standardized data submission and dissemination of proteomics data.
STRING DB
Functional protein association networks and protein-protein interaction data.
AlphaFold DB
Highly accurate protein structure predictions for nearly all known proteins.